Zm00001d016682 (GRMZM5G860214)


Aliases : GRMZM5G860214

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. TOXICOS EN LEVADURA 2 (ATL2)


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d016682
Cluster HCCA cluster: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AT1G20823 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G49210 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Gene family
AT2G34000 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G35420 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G35910 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G18930 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.02 Gene family
Cpa|evm.model.tig00020629.137 No alias No description available 0.02 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.05 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g15080 Os02g0248900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g35347 Os02g0561800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g49710 No alias No description available 0.05 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g34650 Os06g0537600 No description available 0.04 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g39770 Os10g0544600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_55185g0010 No alias No description available 0.03 Gene family
MA_611616g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc06g007230.1.1 Solyc06g007230.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc06g049030.3.1 Solyc06g049030.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc06g053640.1.1 Solyc06g053640.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.02 Gene family
Zm00001d009106 GRMZM2G004519 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d016837 GRMZM2G108085 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d026021 GRMZM2G031280 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.04 Gene family
Zm00001d031880 No alias No description available 0.03 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 80 123
No external refs found!