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  5. LOC_Os08g10020.1

LOC_Os08g10020.1


Description : component PsbR of PS-II complex


Gene families : OG_01_0004731 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004731_tree ,
OG_02_0004390 (LandPlants) Phylogenetic Tree(s): OG_02_0004390_tree ,
OG_03_0005466 (SeedPlants) Phylogenetic Tree(s): OG_03_0005466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g10020.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00162140 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 Archaeplastida
AT1G79040 PSBR photosystem II subunit R 0.08 Archaeplastida
Cre06.g261000 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 Archaeplastida
GSVIVT01020484001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.1 Archaeplastida
Gb_04149 No alias component PsbR of PS-II complex 0.09 Archaeplastida
MA_282g0010 No alias component PsbR of PS-II complex 0.11 Archaeplastida
Mp3g05840.1 No alias component PsbR of PS-II complex 0.1 Archaeplastida
Pp3c16_5650V3.1 No alias photosystem II subunit R 0.05 Archaeplastida
Pp3c27_2340V3.1 No alias photosystem II subunit R 0.05 Archaeplastida
Pp3c5_4230V3.1 No alias photosystem II subunit R 0.02 Archaeplastida
Solyc07g066310.3.1 No alias component PsbR of PS-II complex 0.13 Archaeplastida
Zm00001e021601_P001 No alias component PsbR of PS-II complex 0.14 Archaeplastida
AMTR_s00092p00162140 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 LandPlants
AT1G79040 PSBR photosystem II subunit R 0.09 LandPlants
GSVIVT01020484001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 LandPlants
Gb_04149 No alias component PsbR of PS-II complex 0.08 LandPlants
MA_282g0010 No alias component PsbR of PS-II complex 0.11 LandPlants
Mp3g05840.1 No alias component PsbR of PS-II complex 0.07 LandPlants
Pp3c16_5650V3.1 No alias photosystem II subunit R 0.06 LandPlants
Pp3c27_2320V3.1 No alias photosystem II subunit R 0.01 LandPlants
Pp3c27_2340V3.1 No alias photosystem II subunit R 0.05 LandPlants
Pp3c5_4230V3.1 No alias photosystem II subunit R 0.02 LandPlants
Solyc07g066310.3.1 No alias component PsbR of PS-II complex 0.13 LandPlants
Zm00001e021601_P001 No alias component PsbR of PS-II complex 0.13 LandPlants
AMTR_s00092p00162140 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 SeedPlants
AT1G79040 PSBR photosystem II subunit R 0.09 SeedPlants
GSVIVT01020484001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 SeedPlants
Gb_04149 No alias component PsbR of PS-II complex 0.08 SeedPlants
MA_282g0010 No alias component PsbR of PS-II complex 0.09 SeedPlants
Solyc07g066310.3.1 No alias component PsbR of PS-II complex 0.13 SeedPlants
Zm00001e021601_P001 No alias component PsbR of PS-II complex 0.13 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 34 103
No external refs found!