1. Home
  2. Species
  3. Diplazium proliferum (Lam.) Kaulf.
  4. Sequence
  5. Dac_g32180

Dac_g32180 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : endoribonuclease *(DCL3) & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g32180
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00018890 ATRTL2, RTL2,... Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g010424 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Ceric.14G005300.1 DCL1, CAF,... endoribonuclease (DCL2) of transacting siRNA pathway &... 0.04 OrthoFinder output from all 47 species
Ehy_g15595 DCL1, CAF,... endoribonuclease *(DCL3) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g37050.1 ATRTL2, RTL2,... Ribonuclease 3-like protein 1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
LOC_Os03g38740.1 ATDCL2, DCL2,... Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc10g006200.4.1 ATRTL2, RTL2,... Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g014410.2.1 ATRTL2, RTL2,... ribonuclease (RTL2) 0.04 OrthoFinder output from all 47 species
Zm00001e004530_P001 ATDCL3, DCL3,... endoribonuclease (DCL3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 1354 1467
IPR000999 RNase_III_dom 1139 1277
IPR011545 DEAD/DEAH_box_helicase_dom 96 258
IPR001650 Helicase_C 466 568
IPR003100 PAZ_dom 968 1096
No external refs found!