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  5. Dac_g31801

Dac_g31801


Description : not classified & original description: none


Gene families : OG0004787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g31801
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT4G39420 No alias unknown protein; Has 46 Blast hits to 40 proteins in 10... 0.04 OrthoFinder output from all 47 species
Aev_g14940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69933.t1 Aspi01Gene69933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022255001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01022256001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g02480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_646g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_693456g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g19111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo92664 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g051570.4.1 Solyc04g051570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e006162_P003 Zm00001e006162 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028107 Spatacsin_C_dom 2785 3075
No external refs found!