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  5. Dac_g30913

Dac_g30913


Description : transposon-derived factor HDP1 & original description: none


Gene families : OG0004656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g30913
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT4G27010 No alias CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis... 0.05 OrthoFinder output from all 47 species
Ceric.09G076400.1 Ceric.09G076400 transposon-derived factor HDP1 & original description:... 0.03 OrthoFinder output from all 47 species
Cre02.g074300 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g17555 No alias transposon-derived factor HDP1 & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10022 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g53380.1 LOC_Os04g53380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g07950.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g065500.4.1 Solyc02g065500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006881_P003 Zm00001e006881 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021714 Npa1_N 170 500
IPR032436 NopRA1_C 2191 2381
No external refs found!