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  5. Dac_g30890

Dac_g30890 (ICU2)


Aliases : ICU2

Description : catalytic component *(POLA1) of DNA polymerase alpha complex & original description: none


Gene families : OG0005633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g30890
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00221560 ICU2,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
AT5G67100 ICU2 DNA-directed DNA polymerases 0.02 OrthoFinder output from all 47 species
Azfi_s0226.g059002 ICU2 catalytic component *(POLA1) of DNA polymerase alpha... 0.04 OrthoFinder output from all 47 species
Ceric.09G047200.1 ICU2, Ceric.09G047200 catalytic component *(POLA1) of DNA polymerase alpha... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.42 ICU2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cre04.g214350 ICU2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Dcu_g12848 ICU2 catalytic component *(POLA1) of DNA polymerase alpha... 0.04 OrthoFinder output from all 47 species
GSVIVT01022113001 ICU2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64820.1 ICU2, LOC_Os01g64820 catalytic component POLA1 of DNA polymerase alpha complex 0.02 OrthoFinder output from all 47 species
Len_g55945 ICU2 catalytic component *(POLA1) of DNA polymerase alpha... 0.05 OrthoFinder output from all 47 species
MA_10427959g0010 ICU2 DNA polymerase alpha catalytic subunit OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g03960.1 ICU2 catalytic component POLA1 of DNA polymerase alpha complex 0.02 OrthoFinder output from all 47 species
Solyc02g093300.3.1 ICU2, Solyc02g093300 catalytic component POLA1 of DNA polymerase alpha complex 0.03 OrthoFinder output from all 47 species
Spa_g09409 ICU2 catalytic component *(POLA1) of DNA polymerase alpha... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR015088 Znf_DNA-dir_DNA_pol_B_alpha 1351 1565
IPR006134 DNA-dir_DNA_pol_B_multi_dom 852 1310
IPR024647 DNA_pol_a_cat_su_N 22 89
IPR006133 DNA-dir_DNA_pol_B_exonuc 407 786
No external refs found!