LOC_Os08g07960.1


Description : RAE1 scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0003816 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003816_tree ,
OG_02_0004359 (LandPlants) Phylogenetic Tree(s): OG_02_0004359_tree ,
OG_03_0004418 (SeedPlants) Phylogenetic Tree(s): OG_03_0004418_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g07960.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000215.115 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 Archaeplastida
Cre06.g278097 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 Archaeplastida
Zm00001e039887_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Zm00001e039887_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.01 SeedPlants
Zm00001e039887_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 25 50
IPR001680 WD40_repeat 64 93
IPR001680 WD40_repeat 229 268
IPR001680 WD40_repeat 107 136
No external refs found!