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Aliases : RKP
Description : E3 ubiquitin ligase *(RKP) & original description: none
Gene families : OG0003375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003375_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g01602 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g011552 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g13229 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g16131 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02406 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09679.t1 | RKP, Aspi01Gene09679 | E3 ubiquitin ligase *(RKP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17418 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G032900.1 | RKP, Ceric.30G032900 | E3 ubiquitin ligase *(RKP) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18147 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01022217001 | RKP | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g43380.1 | RKP, LOC_Os07g43380 | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05025 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10429186g0010 | RKP | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_61184g0010 | RKP | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.09 | OrthoFinder output from all 47 species | |
| Mp6g14830.1 | RKP | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13055 | RKP | E3 ubiquitin ligase *(RKP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29957 | No alias | E3 ubiquitin ligase *(RKP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g054140.4.1 | RKP, Solyc04g054140 | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08746 | RKP | E3 ubiquiTin ligase *(RKP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035603_P001 | RKP, Zm00001e035603 | E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |