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  5. Aev_g01583

Aev_g01583


Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0003525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g01583

Target Alias Description ECC score Gene Family Method Actions
AT3G44340 CEF clone eighty-four 0.03 OrthoFinder output from all 47 species
Adi_g059790 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Als_g15380 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Aob_g10600 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00682.t1 CEF, Aspi01Gene00682 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ceric.16G039000.1 Ceric.16G039000 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.3 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g06456 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_38621 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os12g24250.1 CEF, LOC_Os12g24250 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Lfl_g26302 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.07 OrthoFinder output from all 47 species
MA_923164g0010 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Msp_g25229 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Nbi_g12383 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Pir_g11399 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Spa_g52344 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Tin_g10861 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Zm00001e021459_P002 CEF, Zm00001e021459 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 539 778
IPR006895 Znf_Sec23_Sec24 464 502
IPR007123 Gelsolin-like_dom 1001 1068
IPR012990 Sec23_24_beta_S 784 867
IPR006900 Sec23/24_helical_dom 879 975
No external refs found!