1. Home
  2. Species
  3. Diplazium proliferum (Lam.) Kaulf.
  4. Sequence
  5. Dac_g29865

Dac_g29865 (EIF4A-III)


Aliases : EIF4A-III

Description : helicase component *(eIF4A3) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g29865
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Adi_g054674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10607 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05564 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05615 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07229 EIF4A-2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13754 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012425 No alias not classified & original description: CDS=200-1144 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.22 EIF4A-III RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Dde_g43100 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036113001 EIF4A-III Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia 0.03 OrthoFinder output from all 47 species
LOC_Os01g45190.1 EIF4A-III, LOC_Os01g45190 helicase component eIF4A3 of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48750.2 EIF4A-2, LOC_Os06g48750 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
MA_10436040g0020 EIF4A-III helicase component eIF4A3 of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Mp4g09540.1 EIF4A-III helicase component eIF4A3 of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Msp_g12910 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00671 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Pir_g13467 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15917 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002703 No alias not classified & original description: CDS=1-279 0.02 OrthoFinder output from all 47 species
Sam_g10962 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35004 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g096000.2.1 EIF4A-2, Solyc12g096000 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
Spa_g12128 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 71 233
IPR001650 Helicase_C 272 380
No external refs found!