Aev_g01571 (EMB1989, RPB2, NRPB2)

Aliases : EMB1989, RPB2, NRPB2

Description : component *(NRPB2) of RNA polymerase II complex & original description: none

Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g01571

Target	Alias	Description	ECC score	Gene Family Method
AT5G45140	NRPC2	nuclear RNA polymerase C2	0.02	OrthoFinder output from all 47 species
Als_g02614	DRD2, NRPE2,...	component *(NRPE2) of RNA polymerase V complex &...	0.03	OrthoFinder output from all 47 species
Aob_g33991	DRD2, NRPE2,...	component *(NRPE2) of RNA polymerase V complex &...	0.02	OrthoFinder output from all 47 species
Aop_g11083	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.03	OrthoFinder output from all 47 species
Ceric.05G021300.1	EMB1989, RPB2,...	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Ceric.30G032600.1	NRPC2, Ceric.30G032600	component *(NRPC2) of RNA polymerase III complex &...	0.03	OrthoFinder output from all 47 species
Cre02.g075150	EMB1989, RPB2, NRPB2	RNA biosynthesis.DNA-dependent RNA polymerase (Pol)...	0.01	OrthoFinder output from all 47 species
GSVIVT01020543001	EMB1989, RPB2, NRPB2	RNA biosynthesis.DNA-dependent RNA polymerase (Pol)...	0.02	OrthoFinder output from all 47 species
Lfl_g12805	EMB1989, RPB2, NRPB2	component *(NRPB2) of RNA polymerase II complex &...	0.02	OrthoFinder output from all 47 species
Ore_g25703	EMB1989, RPB2, NRPB2	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Pnu_g00855	EMB1989, RPB2, NRPB2	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Sam_g16160	No alias	component *(NRPC2) of RNA polymerase III complex &...	0.02	OrthoFinder output from all 47 species
Smo148107	EMB1989, RPB2, NRPB2	RNA biosynthesis.DNA-dependent RNA polymerase (Pol)...	0.03	OrthoFinder output from all 47 species
Smo443461	NRPC2	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Spa_g04426	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.04	OrthoFinder output from all 47 species
Spa_g20348	EMB1989, RPB2, NRPB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g27723	EMB1989, RPB2, NRPB2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e005007_P001	EMB1989, RPB2,...	subunit 2 of Pol II RNA polymerase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007642	RNA_pol_Rpb2_2	203	394
IPR007645	RNA_pol_Rpb2_3	467	531
IPR007644	RNA_pol_bsu_protrusion	33	442
IPR007641	RNA_pol_Rpb2_7	1081	1172
IPR007120	DNA-dir_RNAP_su2_dom	709	1079
IPR007647	RNA_pol_Rpb2_5	651	702
IPR007646	RNA_pol_Rpb2_4	566	627

External Links

No external refs found!

Aev_g01571 (EMB1989, RPB2, NRPB2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation