AMTR_s00078p00056260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.29

Description : RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0003329 (LandPlants) Phylogenetic Tree(s): OG_02_0003329_tree ,
OG_03_0002749 (SeedPlants) Phylogenetic Tree(s): OG_03_0002749_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00056260
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
MA_20320g0020 No alias RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g014870.3.1 No alias ssRNA polymerase (RDR6) 0.03 Archaeplastida
MA_20320g0020 No alias RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc04g014870.3.1 No alias ssRNA polymerase (RDR6) 0.03 LandPlants
Solyc04g014870.3.1 No alias ssRNA polymerase (RDR6) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 433 1010
No external refs found!