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  5. Aev_g01555

Aev_g01555


Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g01555
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g016371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09212.t1 Aspi01Gene09212 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0149.g053209 No alias not classified & original description: CDS=1-2331 0.02 OrthoFinder output from all 47 species
Cba_g12627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G065200.1 Ceric.19G065200 not classified & original description: pacid=50576378... 0.03 OrthoFinder output from all 47 species
Dde_g03993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 OrthoFinder output from all 47 species
LOC_Os09g25550.1 LOC_Os09g25550 Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
Len_g20786 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g06728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
Mp1g07710.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
Nbi_g36090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09709 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012097 No alias not classified & original description: CDS=661-1995 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015623 No alias not classified & original description: CDS=1-2238 0.02 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1035 1082
IPR002885 Pentatricopeptide_repeat 545 591
IPR002885 Pentatricopeptide_repeat 518 542
IPR002885 Pentatricopeptide_repeat 762 787
IPR002885 Pentatricopeptide_repeat 478 505
IPR002885 Pentatricopeptide_repeat 831 859
IPR002885 Pentatricopeptide_repeat 899 926
IPR002885 Pentatricopeptide_repeat 724 753
IPR002885 Pentatricopeptide_repeat 689 718
IPR002885 Pentatricopeptide_repeat 954 1014
IPR002885 Pentatricopeptide_repeat 406 452
IPR002885 Pentatricopeptide_repeat 605 662
No external refs found!