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  5. LOC_Os08g06480.1

LOC_Os08g06480.1


Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG_01_0000601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000601_tree ,
OG_02_0000851 (LandPlants) Phylogenetic Tree(s): OG_02_0000851_tree ,
OG_03_0000882 (SeedPlants) Phylogenetic Tree(s): OG_03_0000882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g06480.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
MA_10434172g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436445g0020 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
MA_16979g0010 No alias Protein TPR3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_8901047g0010 No alias Topless-related protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g17410.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
Solyc07g008040.4.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.08 Archaeplastida
AT1G80490 TPR1 TOPLESS-related 1 0.02 LandPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 LandPlants
MA_10436445g0020 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
Mp7g17410.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
Solyc07g008040.4.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.02 SeedPlants
AT1G80490 TPR1 TOPLESS-related 1 0.02 SeedPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 SeedPlants
MA_10436445g0020 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
Solyc07g008040.4.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 446 483
IPR001680 WD40_repeat 919 951
No external refs found!