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  5. Aev_g01525

Aev_g01525 (SYCO ARATH)


Aliases : SYCO ARATH

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0004463 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0004463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g01525

Target Alias Description ECC score Gene Family Method Actions
Ala_g13444 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 39 species
Aspi01Gene63523.t1 SYCO ARATH,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Azfi_s2646.g112492 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Ceric.24G080700.1 SYCO ARATH,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 39 species
Dcu_g13662 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 39 species
Len_g23991 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Lfl_g09033 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Msp_g13475 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Nbi_g04383 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Pir_g00649 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0091.g018812 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 39 species
Spa_g09381 SYCO ARATH EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032678 tRNA-synt_1_cat_dom 51 468
No external refs found!