Zm00001d016119 (GRMZM2G155816)

Aliases : GRMZM2G155816

Description : 33.99 development.unspecified NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. SOMBRERO (SMB)

Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d016119
Cluster HCCA cluster: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.02 Gene family
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.03 Gene family
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.02 Gene family
AT5G07680 ANAC080,... NAC domain containing protein 80 0.03 Gene family
LOC_Os02g15340 Os02g0252200 33.99 development.unspecified NAC-domain protein.... 0.07 Gene family
LOC_Os06g33940 Os06g0530400 33.99 development.unspecified NAC-domain protein.... 0.05 Gene family
LOC_Os08g40030 Os08g0511200 33.99 development.unspecified Identified in an enhancer... 0.02 Gene family
MA_15204g0010 No alias 27.3.27 RNA.regulation of transcription.NAC domain... 0.02 Gene family
Solyc06g063430.2.1 Solyc06g063430.2 33.99 development.unspecified NAC domain protein. SMB,... 0.03 Gene family
Solyc06g069710.3.1 Solyc06g069710.3 33.99 development.unspecified NAC domain containing... 0.01 Gene family
Solyc12g017400.2.1 Solyc12g017400.2 33.99 development.unspecified NAC-domain protein.... 0.03 Gene family
Zm00001d003583 GRMZM2G099144 33.99 development.unspecified NAC domain protein. SMB,... 0.03 Gene family
Zm00001d025483 GRMZM2G435824 33.99 development.unspecified NAC domain protein. SMB,... 0.02 Gene family
Zm00001d041791 GRMZM2G139700 33.99 development.unspecified Transcriptional activator... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 11 141
No external refs found!