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Aliases : OPCL1
Description : not classified & original description: none
Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00100040 | evm_27.TU.AmTr_v1... | 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica | 0.05 | OrthoFinder output from all 47 species | |
| AT1G20490 | No alias | AMP-dependent synthetase and ligase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G20500 | No alias | AMP-dependent synthetase and ligase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G38120 | 4CL8 | AMP-dependent synthetase and ligase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g020210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10320 | ACOS5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17436 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0464.g072362 | No alias | not classified & original description: CDS=270-1919 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G005800.1 | OPCL1, Ceric.25G005800 | not classified & original description: pacid=50594129... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G025100.1 | OPCL1, Ceric.36G025100 | not classified & original description: pacid=50568001... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01385 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016171001 | OPCL1 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67540.1 | LOC_Os01g67540 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432138g0010 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04839 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g094520.2.1 | OPCL1, Solyc12g094520 | OPC-8:CoA synthetase | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032697_P002 | Zm00001e032697 | 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig_com | 47 | 231 |
| No external refs found! |