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  5. Zm00001d016054

Zm00001d016054 (GRMZM2G359799)


Aliases : GRMZM2G359799

Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1 (EXPA1)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d016054
Cluster HCCA cluster: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Gene family
AT4G38210 ATEXPA20,... expansin A20 0.03 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.05 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
GSVIVT01016525001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
GSVIVT01019965001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
GSVIVT01024946001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
LOC_Os02g16730 Os02g0267200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.14 Gene family
LOC_Os02g16800 Os02g0267900 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g51040 Os02g0744200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
LOC_Os03g06010 Os03g0155500 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os05g19570 Os05g0276500 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_134592g0010 No alias 10.7 cell wall.modification expansin-like protein.... 0.02 Gene family
MA_474624g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo102623 PACid_15407497 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
Smo75237 PACid_15411282 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Solyc03g115300.2.1 Solyc03g115300.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc06g051800.3.1 Solyc06g051800.3 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Solyc10g084780.2.1 Solyc10g084780.2 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d032876 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032883 GRMZM2G332412 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032884 GRMZM2G035189 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d040249 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d047353 GRMZM2G127029 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 154 232
IPR009009 RlpA-like_DPBB 72 120
No external refs found!