Aliases : ATLIG1, LIG1
Description : EC_6.5 ligase forming phosphoric ester bond & original description: none
Gene families : OG0001904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.28G053000.1 | ATLIG1, LIG1,... | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g278177 | AtLIG6, LIG6 | DNA ligase 6 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01031470001 | ATLIG1, LIG1 | DNA damage response.DNA repair mechanisms.base excision... | 0.02 | OrthoFinder output from all 47 species | |
Len_g24351 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Len_g30745 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g48452 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0162.g023987 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003910 | DNA ligase (ATP) activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
BP | GO:0006310 | DNA recombination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
No external refs found! |