AMTR_s00078p00029420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.9

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0002078 (LandPlants) Phylogenetic Tree(s): OG_02_0002078_tree ,
OG_03_0001123 (SeedPlants) Phylogenetic Tree(s): OG_03_0001123_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00029420
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT1G08465 YAB2 Plant-specific transcription factor YABBY family protein 0.06 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc07g008180.4.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
AT1G08465 YAB2 Plant-specific transcription factor YABBY family protein 0.05 LandPlants
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.02 LandPlants
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.03 LandPlants
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.03 LandPlants
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.02 LandPlants
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.02 LandPlants
Solyc07g008180.4.1 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 LandPlants
Solyc07g008180.4.1 No alias transcription factor (YABBY) 0.03 SeedPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 SeedPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006780 YABBY 16 193
No external refs found!