Description : not classified & original description: none
Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dac_g27629 | |
Cluster | HCCA: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.04G049000.1 | Ceric.04G049000 | not classified & original description: pacid=50632510... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.04G049100.1 | SDE3, Ceric.04G049100 | not classified & original description: pacid=50630575... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.04G049400.1 | SDE3, Ceric.04G049400 | not classified & original description: pacid=50631292... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g31859 | SDE3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_08232 | EMB2765 | Regulator of nonsense transcripts 1 homolog... | 0.03 | OrthoFinder output from all 47 species | |
MA_127081g0010 | EMB2765 | Regulator of nonsense transcripts 1 homolog... | 0.02 | OrthoFinder output from all 47 species | |
MA_5233741g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
MA_5866706g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Mp5g14410.1 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56789 | SDE3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g44773 | SDE3 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | HCCA |
BP | GO:0001510 | RNA methylation | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
BP | GO:0031167 | rRNA methylation | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR041677 | DNA2/NAM7_AAA_11 | 3 | 44 |
No external refs found! |