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  5. LOC_Os08g03640.1

LOC_Os08g03640.1


Description : component RPP0 of LSU proteome component


Gene families : OG_01_0002275 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002275_tree ,
OG_02_0001766 (LandPlants) Phylogenetic Tree(s): OG_02_0001766_tree ,
OG_03_0002404 (SeedPlants) Phylogenetic Tree(s): OG_03_0002404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03640.1
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00231170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
AT3G09200 No alias Ribosomal protein L10 family protein 0.25 Archaeplastida
AT3G11250 No alias Ribosomal protein L10 family protein 0.17 Archaeplastida
Cpa|evm.model.tig00000615.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
Cre12.g520500 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Gb_00059 No alias component RPP0 of LSU proteome component 0.05 Archaeplastida
Gb_29821 No alias 60S acidic ribosomal protein P0 OS=Glycine max... 0.1 Archaeplastida
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.06 Archaeplastida
Mp1g06170.1 No alias component RPP0 of LSU proteome component 0.02 Archaeplastida
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.2 Archaeplastida
Pp3c11_3700V3.1 No alias Ribosomal protein L10 family protein 0.04 Archaeplastida
Pp3c1_8280V3.1 No alias Ribosomal protein L10 family protein 0.09 Archaeplastida
Smo149765 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Smo437282 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc05g054580.3.1 No alias component RPP0 of LSU proteome component 0.2 Archaeplastida
Zm00001e021786_P001 No alias component RPP0 of LSU proteome component 0.2 Archaeplastida
Zm00001e029292_P001 No alias component RPP0 of LSU proteome component 0.2 Archaeplastida
AMTR_s00029p00231170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 LandPlants
AT3G09200 No alias Ribosomal protein L10 family protein 0.24 LandPlants
AT3G11250 No alias Ribosomal protein L10 family protein 0.18 LandPlants
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 LandPlants
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 LandPlants
Gb_00059 No alias component RPP0 of LSU proteome component 0.05 LandPlants
Gb_29821 No alias 60S acidic ribosomal protein P0 OS=Glycine max... 0.1 LandPlants
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.05 LandPlants
Mp1g06170.1 No alias component RPP0 of LSU proteome component 0.02 LandPlants
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.2 LandPlants
Pp3c11_3700V3.1 No alias Ribosomal protein L10 family protein 0.04 LandPlants
Pp3c1_8280V3.1 No alias Ribosomal protein L10 family protein 0.09 LandPlants
Smo149765 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 LandPlants
Smo437282 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 LandPlants
Solyc05g054580.3.1 No alias component RPP0 of LSU proteome component 0.19 LandPlants
Zm00001e021786_P001 No alias component RPP0 of LSU proteome component 0.15 LandPlants
Zm00001e029292_P001 No alias component RPP0 of LSU proteome component 0.16 LandPlants
AMTR_s00029p00231170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 SeedPlants
AT3G09200 No alias Ribosomal protein L10 family protein 0.24 SeedPlants
AT3G11250 No alias Ribosomal protein L10 family protein 0.17 SeedPlants
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 SeedPlants
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 SeedPlants
Gb_00059 No alias component RPP0 of LSU proteome component 0.05 SeedPlants
Gb_29821 No alias 60S acidic ribosomal protein P0 OS=Glycine max... 0.08 SeedPlants
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.04 SeedPlants
Solyc05g054580.3.1 No alias component RPP0 of LSU proteome component 0.18 SeedPlants
Zm00001e021786_P001 No alias component RPP0 of LSU proteome component 0.14 SeedPlants
Zm00001e029292_P001 No alias component RPP0 of LSU proteome component 0.16 SeedPlants

Type GO Term Name Evidence Source
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 8 108
IPR040637 RL10P_insert 114 183
No external refs found!