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  5. Dac_g26317

Dac_g26317


Description : component *(eS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g26317
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT4G25740 No alias RNA binding Plectin/S10 domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G41520 No alias RNA binding Plectin/S10 domain-containing protein 0.05 OrthoFinder output from all 47 species
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g071847 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Adi_g075195 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Adi_g125689 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Aev_g11070 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Ala_g38517 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Aop_g18378 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Aop_g25175 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g31056 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g37205 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g68055 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025251 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g15143 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g24522 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.23G017600.1 Ceric.23G017600 component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001164.5 No alias 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica 0.08 OrthoFinder output from all 47 species
Cre09.g411100 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g00412 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g23653 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.17 OrthoFinder output from all 47 species
Dcu_g50620 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01028854001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Gb_10517 No alias component RPS10 of SSU proteome 0.05 OrthoFinder output from all 47 species
Gb_10518 No alias component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os01g73160.1 LOC_Os01g73160 component RPS10 of SSU proteome 0.06 OrthoFinder output from all 47 species
LOC_Os04g35090.1 LOC_Os04g35090 component RPS10 of SSU proteome 0.09 OrthoFinder output from all 47 species
Lfl_g30568 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_314020g0010 No alias component RPS10 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
Msp_g16642 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Msp_g38658 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pir_g02146 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c10_21170V3.1 Pp3c10_21170 RNA binding Plectin/S10 domain-containing protein 0.02 OrthoFinder output from all 47 species
Pp3c14_1810V3.1 Pp3c14_1810 RNA binding Plectin/S10 domain-containing protein 0.05 OrthoFinder output from all 47 species
Pp3c23_13100V3.1 Pp3c23_13100 RNA binding Plectin/S10 domain-containing protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007542 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12896 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g14221 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Sam_g18288 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Sam_g31720 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g42638 No alias lysine-rich arabinogalactan protein & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g46530 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Smo37555 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g099670.3.1 Solyc01g099670 component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
Solyc12g096540.2.1 Solyc12g096540 component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g13745 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g21377 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Tin_g02351 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Zm00001e008107_P001 Zm00001e008107 component RPS10 of SSU proteome 0.09 OrthoFinder output from all 47 species
Zm00001e028280_P001 Zm00001e028280 component RPS10 of SSU proteome 0.09 OrthoFinder output from all 47 species
Zm00001e040881_P001 Zm00001e040881 component RPS10 of SSU proteome 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!