1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g02210.2

LOC_Os08g02210.2


Description : Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 161.0)


Gene families : OG_01_0001228 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001228_tree ,
OG_02_0002282 (LandPlants) Phylogenetic Tree(s): OG_02_0002282_tree ,
OG_03_0003035 (SeedPlants) Phylogenetic Tree(s): OG_03_0003035_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02210.2
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.08 Archaeplastida
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.11 Archaeplastida
AT4G01995 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.07 Archaeplastida
GSVIVT01028138001 No alias Beta-carotene isomerase D27, chloroplastic... 0.08 Archaeplastida
MA_167711g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18999g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g16410.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.02 Archaeplastida
Pp3c26_11090V3.1 No alias No annotation 0.08 Archaeplastida
Smo99098 No alias Beta-carotene isomerase D27, chloroplastic... 0.02 Archaeplastida
Smo99956 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.03 Archaeplastida
Solyc06g084610.4.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 Archaeplastida
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.1 Archaeplastida
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.06 Archaeplastida
Zm00001e040329_P004 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 Archaeplastida
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.07 LandPlants
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.09 LandPlants
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.06 LandPlants
MA_18999g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp7g16410.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.02 LandPlants
Pp3c26_11090V3.1 No alias No annotation 0.07 LandPlants
Pp3c4_23850V3.1 No alias No annotation 0.01 LandPlants
Smo99956 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.02 LandPlants
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.09 LandPlants
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 LandPlants
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.06 SeedPlants
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 SeedPlants
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.05 SeedPlants
MA_18999g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.09 SeedPlants
Zm00001e029191_P001 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025114 D27-like_C 151 233
No external refs found!