LOC_Os08g01680.1


Description : component CAF1b/FAS2 of CAF1 histone chaperone complex


Gene families : OG_01_0007295 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007295_tree ,
OG_02_0008229 (LandPlants) Phylogenetic Tree(s): OG_02_0008229_tree ,
OG_03_0009397 (SeedPlants) Phylogenetic Tree(s): OG_03_0009397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g01680.1
Cluster HCCA: Cluster_363

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00116490 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.CAF1... 0.02 Archaeplastida
Cpa|evm.model.tig00020629.12 No alias Chromatin assembly factor 1 subunit FAS2 homolog... 0.02 Archaeplastida
MA_6422g0020 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.08 Archaeplastida
Mp4g02980.1 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.09 Archaeplastida
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.05 Archaeplastida
AMTR_s00071p00116490 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.CAF1... 0.02 LandPlants
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
MA_6422g0020 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.08 LandPlants
Mp4g02980.1 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.09 LandPlants
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.05 LandPlants
AMTR_s00071p00116490 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.CAF1... 0.02 SeedPlants
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.02 SeedPlants
MA_6422g0020 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.08 SeedPlants
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 103 140
IPR001680 WD40_repeat 11 40
IPR001680 WD40_repeat 145 181
IPR001680 WD40_repeat 338 363
IPR001680 WD40_repeat 59 92
No external refs found!