LOC_Os08g01100.1


Description : High mobility group B protein 7 OS=Arabidopsis thaliana (sp|q8ldf9|hmgb7_arath : 111.0)


Gene families : OG_01_0000591 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000591_tree ,
OG_02_0000611 (LandPlants) Phylogenetic Tree(s): OG_02_0000611_tree ,
OG_03_0006412 (SeedPlants) Phylogenetic Tree(s): OG_03_0006412_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g01100.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00070550 evm_27.TU.AmTr_v1... High mobility group B protein 7 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G20696 NFD03, HMGB3, NFD3 high mobility group B3 0.03 Archaeplastida
AT2G17560 NFD4, HMGB4, NFD04 high mobility group B4 0.12 Archaeplastida
AT5G23405 No alias HMG-box (high mobility group) DNA-binding family protein 0.03 Archaeplastida
AT5G23420 HMGB6 high-mobility group box 6 0.08 Archaeplastida
Cpa|evm.model.tig00000663.58 No alias No description available 0.03 Archaeplastida
Cre06.g261450 No alias No description available 0.04 Archaeplastida
GSVIVT01026642001 No alias HMG1/2-like protein OS=Glycine max 0.05 Archaeplastida
GSVIVT01034361001 No alias High mobility group B protein 7 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_05796 No alias High mobility group B protein 1 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Gb_32435 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_34784 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.11 Archaeplastida
MA_10436440g0030 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_72555g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86565g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c17_7580V3.1 No alias high mobility group B3 0.07 Archaeplastida
Solyc02g082700.3.1 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 82.0) 0.04 Archaeplastida
Solyc04g008820.3.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e015392_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024274_P002 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.1 Archaeplastida
AMTR_s00171p00070550 evm_27.TU.AmTr_v1... High mobility group B protein 7 OS=Arabidopsis thaliana 0.04 LandPlants
AT2G17560 NFD4, HMGB4, NFD04 high mobility group B4 0.12 LandPlants
AT5G23420 HMGB6 high-mobility group box 6 0.08 LandPlants
GSVIVT01026642001 No alias HMG1/2-like protein OS=Glycine max 0.03 LandPlants
GSVIVT01034361001 No alias High mobility group B protein 7 OS=Arabidopsis thaliana 0.06 LandPlants
Gb_05796 No alias High mobility group B protein 1 OS=Arabidopsis thaliana... 0.09 LandPlants
Gb_32435 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.05 LandPlants
Gb_34784 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.11 LandPlants
MA_10436440g0030 No alias no hits & (original description: none) 0.02 LandPlants
MA_72555g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_86565g0010 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c17_7580V3.1 No alias high mobility group B3 0.04 LandPlants
Solyc02g082700.3.1 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 82.0) 0.02 LandPlants
Solyc04g008820.3.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.11 LandPlants
Zm00001e024274_P002 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.1 LandPlants
Zm00001e034918_P002 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 112.0) 0.02 LandPlants
AMTR_s00171p00070550 evm_27.TU.AmTr_v1... High mobility group B protein 7 OS=Arabidopsis thaliana 0.04 SeedPlants
AT5G23420 HMGB6 high-mobility group box 6 0.08 SeedPlants
GSVIVT01034361001 No alias High mobility group B protein 7 OS=Arabidopsis thaliana 0.06 SeedPlants
Gb_32435 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.05 SeedPlants
Gb_34784 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.1 SeedPlants
MA_86565g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc04g008820.3.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.11 SeedPlants
Zm00001e024274_P002 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009071 HMG_box_dom 93 155
No external refs found!