LOC_Os07g49150.1


Description : regulatory component RPT2 of 26S proteasome


Gene families : OG_01_0003745 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003745_tree ,
OG_02_0004265 (LandPlants) Phylogenetic Tree(s): OG_02_0004265_tree ,
OG_03_0005211 (SeedPlants) Phylogenetic Tree(s): OG_03_0005211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g49150.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00202640 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
AT2G20140 No alias AAA-type ATPase family protein 0.03 Archaeplastida
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.05 Archaeplastida
Cpa|evm.model.tig00001042.6 No alias Protein degradation.26S proteasome.regulatory... 0.08 Archaeplastida
Cre07.g329700 No alias Protein degradation.26S proteasome.regulatory... 0.11 Archaeplastida
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Mp6g16470.1 No alias regulatory component RPT2 of 26S proteasome 0.09 Archaeplastida
Pp3c16_23220V3.1 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Pp3c19_3770V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Pp3c22_7710V3.1 No alias AAA-type ATPase family protein 0.05 Archaeplastida
Smo267030 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Solyc06g083620.3.1 No alias regulatory component RPT2 of 26S proteasome 0.07 Archaeplastida
Zm00001e001356_P001 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida
Zm00001e011018_P001 No alias regulatory component RPT2 of 26S proteasome 0.05 Archaeplastida
Zm00001e035935_P001 No alias regulatory component RPT2 of 26S proteasome 0.04 Archaeplastida
AMTR_s00019p00202640 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.04 LandPlants
AT2G20140 No alias AAA-type ATPase family protein 0.03 LandPlants
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.05 LandPlants
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.04 LandPlants
Mp6g16470.1 No alias regulatory component RPT2 of 26S proteasome 0.09 LandPlants
Pp3c16_23220V3.1 No alias AAA-type ATPase family protein 0.04 LandPlants
Pp3c19_3770V3.1 No alias AAA-type ATPase family protein 0.02 LandPlants
Pp3c22_7710V3.1 No alias AAA-type ATPase family protein 0.05 LandPlants
Smo267030 No alias Protein degradation.26S proteasome.regulatory... 0.02 LandPlants
Solyc06g083620.3.1 No alias regulatory component RPT2 of 26S proteasome 0.07 LandPlants
Zm00001e001356_P001 No alias regulatory component RPT2 of 26S proteasome 0.02 LandPlants
Zm00001e011018_P001 No alias regulatory component RPT2 of 26S proteasome 0.05 LandPlants
Zm00001e035935_P001 No alias regulatory component RPT2 of 26S proteasome 0.04 LandPlants
AMTR_s00019p00202640 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.04 SeedPlants
AT2G20140 No alias AAA-type ATPase family protein 0.03 SeedPlants
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.05 SeedPlants
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.04 SeedPlants
Solyc06g083620.3.1 No alias regulatory component RPT2 of 26S proteasome 0.07 SeedPlants
Zm00001e001356_P001 No alias regulatory component RPT2 of 26S proteasome 0.02 SeedPlants
Zm00001e011018_P001 No alias regulatory component RPT2 of 26S proteasome 0.05 SeedPlants
Zm00001e035935_P001 No alias regulatory component RPT2 of 26S proteasome 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 230 363
IPR032501 Prot_ATP_ID_OB 117 171
IPR041569 AAA_lid_3 385 429
No external refs found!