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  5. LOC_Os07g48340.1

LOC_Os07g48340.1


Description : Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica (sp|q7xhw4|cml24_orysj : 317.0)


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0000085 (LandPlants) Phylogenetic Tree(s): OG_02_0000085_tree ,
OG_03_0001715 (SeedPlants) Phylogenetic Tree(s): OG_03_0001715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48340.1
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00186360 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01015585001 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_130379g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
MA_472945g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c12_14390V3.1 No alias centrin 2 0.01 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Smo181303 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
Smo81875 No alias Calmodulin-2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo96597 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e029211_P001 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.01 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035870_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 Archaeplastida
AMTR_s00077p00177420 evm_27.TU.AmTr_v1... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.01 LandPlants
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 LandPlants
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.01 LandPlants
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 LandPlants
LOC_Os06g07560.1 No alias Probable calcium-binding protein CML30 OS=Oryza sativa... 0.03 LandPlants
MA_472945g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 LandPlants
Zm00001e031053_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e035870_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 LandPlants
AMTR_s00077p00177420 evm_27.TU.AmTr_v1... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.01 SeedPlants
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 68
IPR002048 EF_hand_dom 125 190
No external refs found!