Dac_g23037 (UBP23)

Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g23037
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
AT5G57990	UBP23	ubiquitin-specific protease 23	0.02	OrthoFinder output from all 47 species
Als_g08916	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g19936	UBP25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g04917	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07711	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Cre06.g248950	UBP25	Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cre14.g629300	UBP23	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Dcu_g09670	UBP25	deubiquitinase *(UBP25) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01000696001	UBP15	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
LOC_Os02g14730.1	UBP15, LOC_Os02g14730	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
LOC_Os08g37350.1	UBP17, LOC_Os08g37350	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
MA_10429414g0020	UBP18	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
MA_132593g0020	UBP23	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_53569g0010	UBP23	deubiquitinase (UBP23)	0.03	OrthoFinder output from all 47 species
Mp1g03220.1	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Msp_g14457	UBP25	deubiquitinase *(UBP25) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g09620	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27850	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13940	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26124	UBP23	deubiquitinase *(UBP23) & original description: none	0.08	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Zm00001e023273_P001	UBP21, Zm00001e023273	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e024878_P003	UBP15, Zm00001e024878	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e027381_P003	UBP25, Zm00001e027381	deubiquitinase (UBP25)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	97	394

External Links

No external refs found!

Dac_g23037 (UBP23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation