LOC_Os07g47120.1


Description : beta amylase


Gene families : OG_01_0000278 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000278_tree ,
OG_02_0007349 (LandPlants) Phylogenetic Tree(s): OG_02_0007349_tree ,
OG_03_0003218 (SeedPlants) Phylogenetic Tree(s): OG_03_0003218_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g47120.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT4G15210 RAM1, BMY1,... beta-amylase 5 0.03 Archaeplastida
Gb_02555 No alias beta amylase 0.02 Archaeplastida
Gb_08413 No alias beta amylase 0.02 Archaeplastida
Gb_08421 No alias beta amylase 0.02 Archaeplastida
Gb_23977 No alias beta amylase 0.02 Archaeplastida
MA_7600339g0010 No alias Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c5_22190V3.1 No alias beta-amylase 1 0.01 Archaeplastida
Solyc01g067660.3.1 No alias beta amylase 0.03 Archaeplastida
Solyc08g005780.4.1 No alias beta amylase. transcription factor (BES/BZR).... 0.02 Archaeplastida
Zm00001e000343_P005 No alias beta amylase 0.11 Archaeplastida
Zm00001e012728_P005 No alias beta amylase 0.17 Archaeplastida
Zm00001e035797_P003 No alias beta amylase 0.02 Archaeplastida
Solyc01g067660.3.1 No alias beta amylase 0.02 LandPlants

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 78 493
No external refs found!