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  5. Dac_g22884

Dac_g22884


Description : scaffold factor *(COILIN) of Cajal body formation & original description: none


Gene families : OG0006961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g22884
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G13030 No alias sphere organelles protein-related 0.02 OrthoFinder output from all 47 species
Adi_g056217 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
Aob_g32147 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020930.21 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g45248 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
Ehy_g02841 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
Msp_g44577 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
Nbi_g01147 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
Spa_g29204 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031722 Coilin_N 15 180
No external refs found!