Aliases : AGO1
Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00265690 | PNH, AGO10, ZLL,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00008p00203090 | AGO4, OCP11,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00008p00204110 | AGO9,... | Protein argonaute 4B OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.04 | OrthoFinder output from all 47 species | |
Als_g06375 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g11793 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g58865 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0074.g037455 | PNH, AGO10, ZLL | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0460.g072055 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G056900.1 | AGO1, Ceric.28G056900 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018054001 | PNH, AGO10, ZLL | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01030512001 | AGO6 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037488001 | AGO4, OCP11 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g51310.2 | AGO1, LOC_Os06g51310 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
Len_g08893 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
MA_10427420g0010 | AGO1 | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
MA_14457g0010 | AGO9 | Protein argonaute 4A OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
MA_594g0010 | PNH, AGO10, ZLL | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g13472 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g14613 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g07722 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g40097 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g15671 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g18269 | AGO6 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c17_350V3.1 | AGO1, Pp3c17_350 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002271 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g39081 | No alias | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g006790.3.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025496_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037347_P002 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e041452_P004 | AGO1, Zm00001e041452 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016790 | thiolester hydrolase activity | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
No external refs found! |