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  5. Dac_g21975

Dac_g21975 (TOM1, ATTOM1)


Aliases : TOM1, ATTOM1

Description : tobamovirus multiplication replication host factor *(TOM1) & original description: none


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21975

Target Alias Description ECC score Gene Family Method Actions
Adi_g006847 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Aop_g04381 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007119 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 6 276
No external refs found!