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  5. Aev_g00763

Aev_g00763


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g00763
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cba_g01982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g71780.1 LOC_Os01g71780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_28858g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g17880.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g35419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g113850.1.1 Solyc03g113850 Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 360 401
IPR001680 WD40_repeat 225 261
IPR001680 WD40_repeat 273 308
IPR001680 WD40_repeat 192 220
IPR001680 WD40_repeat 320 352
No external refs found!