Dac_g21167


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00251660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species ECC Pair graph <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1924026" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1924026">AMTR_s00066p00056580</a></td> <td>evm_27.TU.AmTr_v1...</td> <td>Solute transport.carrier-mediated transport.APC...</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37426869" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/2405736" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/2405736">Azfi_s0870.g090592</a></td> <td><span class="text-muted">No alias</span></td> <td>solute transporter *(AAAP) & original description: CDS=69-1490</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429109" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1665383" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1665383">LOC_Os11g19240.1</a></td> <td>LOC_Os11g19240</td> <td>solute transporter (AAAP)</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429800" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/615150" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/615150">Msp_g19411</a></td> <td><span class="text-muted">No alias</span></td> <td>solute transporter *(AAAP) & original description: none</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429802" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1685766" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1685766">Smo438611</a></td> <td><span class="text-muted">No alias</span></td> <td>Solute transport.carrier-mediated transport.APC...</td> <td>0.05</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429804" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1700501" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1700501">Solyc03g013440.4.1</a></td> <td>Solyc03g013440</td> <td>solute transporter (AAAP)</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429806" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1701426" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1701426">Solyc03g078150.3.1</a></td> <td>Solyc03g078150</td> <td>solute transporter (AAAP)</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/37429808" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1862106/78/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4117" data-toggle="tooltip" data-placement="top" title=""Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator." [ISBN:0198506732]">GO:0005524</a></td> <td class="col-xs-6">ATP binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9345" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source. Primary energy sources known to be coupled to transport are chemical such as ATP hydrolysis, redox energy and photon energy." [GOC:mtg_transport, PMID:31613498]">GO:0015399</a></td> <td class="col-xs-6">primary active transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13266" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of a specific substance or related group of substances from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction." [GOC:mtg_transport, ISBN:0815340729]">GO:0022804</a></td> <td class="col-xs-6">active transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13876" data-toggle="tooltip" data-placement="top" title=""Binding to an adenyl nucleotide, an adenosine esterified with (ortho)phosphate." [ISBN:0198506732]">GO:0030554</a></td> <td class="col-xs-6">adenyl nucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/15753" data-toggle="tooltip" data-placement="top" title=""Binding to an adenyl ribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety." [GOC:mah]">GO:0032559</a></td> <td class="col-xs-6">adenyl ribonucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/20518" data-toggle="tooltip" data-placement="top" title=""Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source." [GOC:mtg_transport, ISBN:0815340729]">GO:0042626</a></td> <td class="col-xs-6">ATPase-coupled transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21008" data-toggle="tooltip" data-placement="top" title=""Binding to an ion, a charged atoms or groups of atoms." [GOC:jl]">GO:0043167</a></td> <td class="col-xs-6">ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/35164" data-toggle="tooltip" data-placement="top" title=""Binding to an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure." [GOC:sjw, PMID:7583672]">GO:0097159</a></td> <td class="col-xs-6">organic cyclic compound binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/38770" data-toggle="tooltip" data-placement="top" title=""Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane." [PMID:26517899]">GO:0140359</a></td> <td class="col-xs-6">ABC-type transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/40810" data-toggle="tooltip" data-placement="top" title=""Binding to heterocyclic compound." [GOC:TermGenie]">GO:1901363</a></td> <td class="col-xs-6">heterocyclic compound binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/11096">IPR013057</a></td> <td class="col-xs-5">AA_transpt_TM</td> <td class="col-xs-2">341</td> <td class="col-xs-2">729</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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