Dac_g20877


Description : transcriptional co-regulator *(Oberon) & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g20877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00104550 evm_27.TU.AmTr_v1... Protein OBERON 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G48160 OBE2 Protein of unknown function (DUF1423) 0.03 OrthoFinder output from all 47 species
Adi_g058256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13762 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Als_g27966 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72654.t1 Aspi01Gene72654 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13992 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G029700.1 OBE2, Ceric.18G029700 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G032700.1 Ceric.22G032700 transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g22990 No alias transcriptional co-regulator *(Oberon) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g02961 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18097 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011608001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g13590.1 LOC_Os03g13590 no description available(sp|q10pc5|tta1_orysj : 1188.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g32980.1 OBE2, LOC_Os12g32980 OBERON-like protein OS=Nicotiana benthamiana... 0.04 OrthoFinder output from all 47 species
Len_g24702 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Msp_g02073 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ore_g21141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20247 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015578 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36511 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Smo86264 No alias Protein OBERON 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.04 OrthoFinder output from all 47 species
Zm00001e000995_P002 Zm00001e000995 no description available(sp|q10pc5|tta1_orysj : 940.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 1004 1125
IPR032535 Oberon_cc 1193 1317
No external refs found!