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  5. Dac_g20856

Dac_g20856


Description : not classified & original description: none


Gene families : OG0001713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g20856

Target Alias Description ECC score Gene Family Method Actions
Adi_g054680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015623 No alias not classified & original description: CDS=163-2334 0.05 OrthoFinder output from all 47 species
Cba_g17551 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.14G056800.1 Ceric.14G056800 not classified & original description: pacid=50632955... 0.04 OrthoFinder output from all 47 species
Ceric.19G014600.1 Ceric.19G014600 not classified & original description: pacid=50575726... 0.04 OrthoFinder output from all 47 species
Ceric.19G027200.1 Ceric.19G027200 not classified & original description: pacid=50576324... 0.03 OrthoFinder output from all 47 species
Ceric.31G044500.1 Ceric.31G044500 not classified & original description: pacid=50574988... 0.04 OrthoFinder output from all 47 species
Dde_g10007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10147 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g20638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 319 345
IPR019734 TPR_repeat 693 719
IPR019734 TPR_repeat 568 596
No external refs found!