Dac_g20808

Description : aminoacyl-tRNA binding factor *(eEF1A)) & original description: none

Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g20808
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.02	OrthoFinder output from all 47 species
Als_g11645	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Als_g39127	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Aop_g09508	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
LOC_Os03g08010.1	LOC_Os03g08010	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08020.1	LOC_Os03g08020	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species
LOC_Os03g08050.1	LOC_Os03g08050	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species
Len_g28220	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
MA_10313749g0010	No alias	Elongation factor 1-alpha OS=Hordeum vulgare...	0.02	OrthoFinder output from all 47 species
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species
Msp_g21467	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.05	OrthoFinder output from all 47 species
Solyc06g005060.3.1	Solyc06g005060	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Spa_g50273	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	220	328
IPR000795	T_Tr_GTP-bd_dom	1	123
IPR004161	EFTu-like_2	147	212

External Links

No external refs found!