Description : not classified & original description: none
Gene families : OG0005866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005866_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g00563 | |
Cluster | HCCA: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00092p00137780 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
AT3G57000 | No alias | nucleolar essential protein-related | 0.02 | OrthoFinder output from all 47 species | |
Aop_g01005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0193.g057130 | No alias | not classified & original description: CDS=139-690 | 0.03 | OrthoFinder output from all 47 species | |
Cre01.g009950 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Len_g01659 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c24_11670V3.1 | Pp3c24_11670 | nucleolar essential protein-related | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015317_P005 | Zm00001e015317 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0070037 | rRNA (pseudouridine) methyltransferase activity | IEA | Interproscan |
BP | GO:0070475 | rRNA base methylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005777 | peroxisome | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
MF | GO:0030515 | snoRNA binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005304 | Rbsml_bgen_MeTrfase_EMG1/NEP1 | 30 | 227 |
No external refs found! |