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  5. Dac_g19098

Dac_g19098 (UBP1B)


Aliases : UBP1B

Description : stress granule assembly factor *(UBP1) & original description: none


Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g19098
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00269220 evm_27.TU.AmTr_v1... Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.02 OrthoFinder output from all 47 species
LOC_Os07g42380.1 LOC_Os07g42380 mRNA-binding regulatory factor (UBP1) 0.01 OrthoFinder output from all 47 species
Solyc06g063000.3.1 UBP1B, Solyc06g063000 mRNA-binding regulatory factor (UBP1) 0.03 OrthoFinder output from all 47 species
Spa_g55638 UBP1B stress granule assembly factor *(UBP1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 356 421
IPR000504 RRM_dom 578 643
IPR000504 RRM_dom 441 511
No external refs found!