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  5. Aev_g00473

Aev_g00473


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g00473
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01520 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
LOC_Os01g67850.1 LOC_Os01g67850 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g58320.2 LOC_Os04g58320 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os07g46700.1 LOC_Os07g46700 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e004453_P001 Zm00001e004453 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e004460_P001 Zm00001e004460 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e041948_P002 Zm00001e041948 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!