Dac_g18580


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18580

Target Alias Description ECC score Gene Family Method Actions
Adi_g003753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036834 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083433 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05283 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12178 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13785 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17629 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24238 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25114 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31741 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31812 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22321 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03404 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28532 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17429 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37184 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26566 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06749 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100606g0010 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_10429958g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Msp_g13188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16919 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06257 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57072 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04120 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06686 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07718 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17793 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37419 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 611 657
IPR002885 Pentatricopeptide_repeat 308 354
IPR002885 Pentatricopeptide_repeat 406 453
IPR002885 Pentatricopeptide_repeat 103 150
IPR002885 Pentatricopeptide_repeat 713 752
IPR002885 Pentatricopeptide_repeat 279 304
IPR002885 Pentatricopeptide_repeat 585 607
IPR002885 Pentatricopeptide_repeat 480 503
IPR002885 Pentatricopeptide_repeat 208 238
IPR002885 Pentatricopeptide_repeat 512 541
No external refs found!