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  5. Dac_g18278

Dac_g18278


Description : not classified & original description: none


Gene families : OG0006414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00208640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g10690... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37776.t1 Aspi01Gene37776 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020562 No alias not classified & original description: CDS=129-2003 0.02 OrthoFinder output from all 47 species
Sam_g19414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo52692 No alias Pentatricopeptide repeat-containing protein At5g10690... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 296 324
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 104 153
IPR000644 CBS_dom 544 606
No external refs found!