AMTR_s00077p00151100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.154

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor


Gene families : OG_01_0000741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000741_tree ,
OG_02_0001199 (LandPlants) Phylogenetic Tree(s): OG_02_0001199_tree ,
OG_03_0001296 (SeedPlants) Phylogenetic Tree(s): OG_03_0001296_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00151100
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01022143001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Solyc06g007530.2.1 No alias transcription factor (REM) 0.04 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
LOC_Os03g08620.1 No alias transcription factor (REM) 0.01 LandPlants
LOC_Os06g09420.1 No alias transcription factor (REM) 0.02 LandPlants
Mp2g08790.1 No alias transcription factor (REM) 0.03 LandPlants
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
Solyc04g079130.2.1 No alias transcription factor (REM) 0.02 LandPlants
Solyc06g007530.2.1 No alias transcription factor (REM) 0.04 LandPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.02 LandPlants
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 LandPlants
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.03 SeedPlants
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 SeedPlants
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 SeedPlants
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 SeedPlants
LOC_Os03g08620.1 No alias transcription factor (REM) 0.01 SeedPlants
Solyc04g079130.2.1 No alias transcription factor (REM) 0.02 SeedPlants
Solyc06g007530.2.1 No alias transcription factor (REM) 0.04 SeedPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.02 SeedPlants
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 129 218
No external refs found!