Zm00001d014690 (GRMZM2G317900)


Aliases : GRMZM2G317900

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor that


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d014690
Cluster HCCA cluster: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AT1G19220 ARF19, IAA22, ARF11 auxin response factor 19 0.03 Gene family
GSVIVT01011008001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01032251001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_10432349g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_85955g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Smo425183 PACid_15402913 No description available 0.02 Gene family
Solyc01g103050.3.1 Solyc01g103050.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc05g047460.3.1 Solyc05g047460.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Solyc05g056040.3.1 Solyc05g056040.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 949 1035
IPR003340 B3_DNA-bd 71 172
IPR010525 Auxin_resp 197 280
No external refs found!