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  5. LOC_Os07g40930.1

LOC_Os07g40930.1


Description : component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex


Gene families : OG_01_0005944 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005944_tree ,
OG_02_0007050 (LandPlants) Phylogenetic Tree(s): OG_02_0007050_tree ,
OG_03_0008311 (SeedPlants) Phylogenetic Tree(s): OG_03_0008311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g40930.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT5G15550 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Archaeplastida
Cre17.g710100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01032921001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Gb_31445 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.07 Archaeplastida
MA_27009g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.04 Archaeplastida
MA_97224g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.04 Archaeplastida
Mp3g03210.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.07 Archaeplastida
Pp3c23_13260V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Smo175982 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc02g088780.4.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.12 Archaeplastida
Zm00001e035486_P001 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.14 Archaeplastida
AT5G15550 No alias Transducin/WD40 repeat-like superfamily protein 0.07 LandPlants
GSVIVT01032921001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 LandPlants
Gb_31445 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 LandPlants
MA_27009g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.03 LandPlants
MA_97224g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.04 LandPlants
Mp3g03210.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 LandPlants
Pp3c23_13260V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Smo175982 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 LandPlants
Solyc02g088780.4.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.11 LandPlants
Zm00001e035486_P001 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.14 LandPlants
AT5G15550 No alias Transducin/WD40 repeat-like superfamily protein 0.07 SeedPlants
GSVIVT01032921001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 SeedPlants
Gb_31445 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.06 SeedPlants
MA_27009g0010 No alias Ribosome biogenesis protein WDR12 homolog OS=Oryza... 0.03 SeedPlants
Solyc02g088780.4.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.1 SeedPlants
Zm00001e035486_P001 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.14 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 142 183
IPR001680 WD40_repeat 268 302
IPR001680 WD40_repeat 353 390
IPR001680 WD40_repeat 199 233
IPR012972 NLE 13 80
No external refs found!