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  5. LOC_Os07g40030.1

LOC_Os07g40030.1


Description : auxiliary component S2Lb of COMPASS histone trimethylation complex


Gene families : OG_01_0002770 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002770_tree ,
OG_02_0002507 (LandPlants) Phylogenetic Tree(s): OG_02_0002507_tree ,
OG_03_0007583 (SeedPlants) Phylogenetic Tree(s): OG_03_0007583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g40030.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020920.2 No alias Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp2g16850.1 No alias auxiliary component S2Lb of COMPASS histone... 0.03 Archaeplastida
Zm00001e007115_P002 No alias auxiliary component S2Lb of COMPASS histone... 0.02 Archaeplastida
Zm00001e032297_P001 No alias Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis... 0.03 Archaeplastida
AMTR_s00014p00249480 evm_27.TU.AmTr_v1... Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana 0.02 LandPlants
AT5G66240 No alias Transducin/WD40 repeat-like superfamily protein 0.01 LandPlants
GSVIVT01032417001 No alias Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana 0.02 LandPlants
Mp2g16850.1 No alias auxiliary component S2Lb of COMPASS histone... 0.03 LandPlants
Smo83551 No alias Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana 0.01 LandPlants
Zm00001e007115_P002 No alias auxiliary component S2Lb of COMPASS histone... 0.02 LandPlants
Zm00001e032297_P001 No alias Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis... 0.03 LandPlants
AT5G66240 No alias Transducin/WD40 repeat-like superfamily protein 0.01 SeedPlants
Solyc02g083940.3.1 No alias auxiliary component S2Lb of COMPASS histone... 0.01 SeedPlants
Zm00001e007115_P002 No alias auxiliary component S2Lb of COMPASS histone... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 105 140
IPR001680 WD40_repeat 238 270
No external refs found!