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  5. Dac_g16960

Dac_g16960


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g16960

Target Alias Description ECC score Gene Family Method Actions
Ala_g06674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061170 No alias not classified & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Cba_g12924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.05 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.03 OrthoFinder output from all 47 species
Ceric.12G065400.1 Ceric.12G065400 not classified & original description: pacid=50601520... 0.03 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.04 OrthoFinder output from all 47 species
Ceric.30G033300.1 Ceric.30G033300 not classified & original description: pacid=50608686... 0.05 OrthoFinder output from all 47 species
Dde_g00860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 164 192
IPR002885 Pentatricopeptide_repeat 405 431
IPR002885 Pentatricopeptide_repeat 373 399
IPR002885 Pentatricopeptide_repeat 611 650
IPR002885 Pentatricopeptide_repeat 194 242
IPR002885 Pentatricopeptide_repeat 436 485
IPR002885 Pentatricopeptide_repeat 264 313
IPR002885 Pentatricopeptide_repeat 506 555
No external refs found!