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  5. Dac_g16369

Dac_g16369


Description : not classified & original description: none


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g16369

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00175460 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00222730 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00223150 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g07470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G058800.1 Ceric.04G058800 not classified & original description: pacid=50631350... 0.04 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022440001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_14149 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_21243 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_38984 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g08570.1 LOC_Os10g08570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g10424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_92056g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g02777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062290.2.1 Solyc02g062290 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g062340.2.1 Solyc10g062340 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g47784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 461 525
IPR000504 RRM_dom 284 353
IPR000504 RRM_dom 364 428
No external refs found!