Zm00001d014378 (GRMZM2G126197)


Aliases : GRMZM2G126197

Description : 27.1.3.6 RNA.processing.3 end processing.CPSF30 Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion. cleavage and polyadenylation specificity factor 30 (CPSF30)


Gene families : OG_01_0003966 (Gene family) Phylogenetic Tree(s): OG0003966_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d014378
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT1G30460 CPSF30, ATCPSF30 cleavage and polyadenylation specificity factor 30 0.03 Gene family
GSVIVT01021617001 No alias 27.1.3.6 RNA.processing.3 end processing.CPSF30 Encodes... 0.02 Gene family
LOC_Os06g46400 Os06g0677700 27.1.3.6 RNA.processing.3 end processing.CPSF30 Encodes... 0.03 Gene family
Solyc02g021760.3.1 Solyc02g021760.3 27.1.3.6 RNA.processing.3 end processing.CPSF30 Encodes... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007275 YTH_domain 240 374
No external refs found!